<?xml version="1.0" encoding="UTF-8"?>
<feed xmlns="http://www.w3.org/2005/Atom" xml:base="http://www.plosone.org/">
  <title type="text">PLoS ONE Alerts: Nephrology</title>
  <link rel="self" href="http://www.plosone.org/" title="PLoS ONE" />
  <author>
    <name>PLoS</name>
    <uri>http://www.plosone.org/</uri>
    <email>webmaster@plos.org</email>
  </author>
  <subtitle>Publishing science</subtitle>
  <id>info:doi/10.1371/feed.pone?category=Nephrology</id>
  <rights>This work is licensed under a Creative Commons Attribution-Share Alike 3.0 License</rights>
  <icon>${webserver-url}images/favicon.ico</icon>
  <logo>${webserver-url}images/favicon.ico</logo>
  <updated>2009-11-22T06:13:13Z</updated>
  <atom10:link xmlns:atom10="http://www.w3.org/2005/Atom" rel="hub" href="http://pubsubhubbub.appspot.com" /><entry>
    <title>Evidence for a Lack of a Direct Transcriptional Suppression of the Iron Regulatory Peptide Hepcidin by Hypoxia-Inducible Factors</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007875" title="Evidence for a Lack of a Direct Transcriptional Suppression of the Iron Regulatory Peptide Hepcidin by Hypoxia-Inducible Factors" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007875&amp;representation=XML" title="(XML) Evidence for a Lack of a Direct Transcriptional Suppression of the Iron Regulatory Peptide Hepcidin by Hypoxia-Inducible Factors" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007875&amp;representation=PDF" title="(PDF) Evidence for a Lack of a Direct Transcriptional Suppression of the Iron Regulatory Peptide Hepcidin by Hypoxia-Inducible Factors" />
    <author>
      <name>Melanie Volke et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007875</id>
    <updated>2009-11-18T08:00:00Z</updated>
    <published>2009-11-18T08:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Hepcidin is a major regulator of iron metabolism and plays a key role in anemia of chronic disease, reducing intestinal iron uptake and release from body iron stores. Hypoxia and chemical stabilizers of the hypoxia-inducible transcription factor (HIF) have been shown to suppress hepcidin expression. We therefore investigated the role of HIF in hepcidin regulation.&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Hepcidin mRNA was down-regulated in hepatoma cells by chemical HIF stabilizers and iron chelators, respectively. In contrast, the response to hypoxia was variable. The decrease in hepcidin mRNA was not reversed by HIF-1α or HIF-2α knock-down or by depletion of the HIF and iron regulatory protein (IRP) target transferrin receptor 1 (TfR1). However, the response of hepcidin to hypoxia and chemical HIF inducers paralleled the regulation of transferrin receptor 2 (TfR2), one of the genes critical to hepcidin expression. Hepcidin expression was also markedly and rapidly decreased by serum deprivation, independent of transferrin-bound iron, and by the phosphatidylinositol 3 (PI3) kinase inhibitor LY294002, indicating that growth factors are required for hepcidin expression &lt;i&gt;in vitro&lt;/i&gt;. Hepcidin promoter constructs mirrored the response of mRNA levels to interleukin-6 and bone morphogenetic proteins, but not consistently to hypoxia or HIF stabilizers, and deletion of the putative HIF binding motifs did not alter the response to different hypoxic stimuli. In mice exposed to carbon monoxide, hypoxia or the chemical HIF inducer &lt;i&gt;N&lt;/i&gt;-oxalylglycine, liver hepcidin 1 mRNA was elevated rather than decreased.&lt;/p&gt;

Conclusions/Significance

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Taken together, these data indicate that hepcidin is neither a direct target of HIF, nor indirectly regulated by HIF through induction of TfR1 expression. Hepcidin mRNA expression &lt;i&gt;in vitro&lt;/i&gt; is highly sensitive to the presence of serum factors and PI3 kinase inhibition and parallels TfR2 expression.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>A Novel &lt;italic&gt;TRPC6&lt;/italic&gt; Mutation That Causes Childhood FSGS</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007771" title="A Novel &lt;italic&gt;TRPC6&lt;/italic&gt; Mutation That Causes Childhood FSGS" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007771&amp;representation=PDF" title="(PDF) A Novel &lt;italic&gt;TRPC6&lt;/italic&gt; Mutation That Causes Childhood FSGS" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007771&amp;representation=XML" title="(XML) A Novel &lt;italic&gt;TRPC6&lt;/italic&gt; Mutation That Causes Childhood FSGS" />
    <author>
      <name>Saskia F. Heeringa et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007771</id>
    <updated>2009-11-10T08:00:00Z</updated>
    <published>2009-11-10T08:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;&lt;i&gt;TRPC6&lt;/i&gt;, encoding a member of the transient receptor potential (TRP) superfamily of ion channels, is a calcium-permeable cation channel, which mediates capacitive calcium entry into the cell. Until today, seven different mutations in &lt;i&gt;TRPC6&lt;/i&gt; have been identified as a cause of autosomal-dominant focal segmental glomerulosclerosis (FSGS) in adults.&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Here we report a novel &lt;i&gt;TRPC6&lt;/i&gt; mutation that leads to early onset FSGS. We identified one family in whom disease segregated with a novel &lt;i&gt;TRPC6&lt;/i&gt; mutation (M132T), that also affected pediatric individuals as early as nine years of age. Twenty-one pedigrees compatible with an autosomal-dominant mode of inheritance and biopsy-proven FSGS were selected from a worldwide cohort of 550 families with steroid resistant nephrotic syndrome (SRNS). Whole cell current recordings of the mutant TRPC6 channel, compared to the wild-type channel, showed a 3 to 5-fold increase in the average out- and inward TRPC6 current amplitude. The mean inward calcium current of M132T was 10-fold larger than that of wild-type TRPC6. Interestingly, M132T mutants also lacked time-dependent inactivation. Generation of a novel double mutant M132T/N143S did not further augment TRPC6 channel activity.&lt;/p&gt;

Conclusions

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;In summary, our data shows that TRPC6 mediated FSGS can also be found in children. The large increase in channel currents and impaired channel inactivation caused by the M132T mutant leads to an aggressive phenotype that underlines the importance of calcium dose channeled through TRPC6.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Tissue Compartment Analysis for Biomarker Discovery by Gene Expression Profiling</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007779" title="Tissue Compartment Analysis for Biomarker Discovery by Gene Expression Profiling" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007779&amp;representation=PDF" title="(PDF) Tissue Compartment Analysis for Biomarker Discovery by Gene Expression Profiling" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007779&amp;representation=XML" title="(XML) Tissue Compartment Analysis for Biomarker Discovery by Gene Expression Profiling" />
    <author>
      <name>Antoine Disset et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007779</id>
    <updated>2009-11-10T08:00:00Z</updated>
    <published>2009-11-10T08:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Although high throughput technologies for gene profiling are reliable tools, sample/tissue heterogeneity limits their outcomes when applied to identify molecular markers. Indeed, inter-sample differences in cell composition contribute to scatter the data, preventing detection of small but relevant changes in gene expression level. To date, attempts to circumvent this difficulty were based on isolation of the different cell structures constituting biological samples. As an alternate approach, we developed a tissue compartment analysis (TCA) method to assess the cell composition of tissue samples, and applied it to standardize data and to identify biomarkers.&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;TCA is based on the comparison of mRNA expression levels of specific markers of the different constitutive structures in pure isolated structures, on the one hand, and in the whole sample on the other. TCA method was here developed with human kidney samples, as an example of highly heterogeneous organ. It was validated by comparison of the data with those obtained by histo-morphometry. TCA demonstrated the extreme variety of composition of kidney samples, with abundance of specific structures varying from 5 to 95% of the whole sample. TCA permitted to accurately standardize gene expression level amongst &amp;gt;100 kidney biopsies, and to identify otherwise imperceptible molecular disease markers.&lt;/p&gt;

Conclusions/Significance

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Because TCA does not require specific preparation of sample, it can be applied to all existing tissue or cDNA libraries or to published data sets, inasmuch specific operational compartments markers are available. In human, where the small size of tissue samples collected in clinical practice accounts for high structural diversity, TCA is well suited for the identification of molecular markers of diseases, and the follow up of identified markers in single patients for diagnosis/prognosis and evaluation of therapy efficiency. In laboratory animals, TCA will interestingly be applied to central nervous system where tissue heterogeneity is a limiting factor.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>GLI3 Repressor Controls Nephron Number via Regulation of &lt;italic&gt;Wnt11&lt;/italic&gt; and &lt;italic&gt;Ret&lt;/italic&gt; in Ureteric Tip Cells</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007313" title="GLI3 Repressor Controls Nephron Number via Regulation of &lt;italic&gt;Wnt11&lt;/italic&gt; and &lt;italic&gt;Ret&lt;/italic&gt; in Ureteric Tip Cells" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007313&amp;representation=PDF" title="(PDF) GLI3 Repressor Controls Nephron Number via Regulation of &lt;italic&gt;Wnt11&lt;/italic&gt; and &lt;italic&gt;Ret&lt;/italic&gt; in Ureteric Tip Cells" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007313&amp;representation=XML" title="(XML) GLI3 Repressor Controls Nephron Number via Regulation of &lt;italic&gt;Wnt11&lt;/italic&gt; and &lt;italic&gt;Ret&lt;/italic&gt; in Ureteric Tip Cells" />
    <author>
      <name>Jason E. Cain et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007313</id>
    <updated>2009-10-07T07:00:00Z</updated>
    <published>2009-10-07T07:00:00Z</published>
    <content type="html">&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Truncating GLI3 mutations in Pallister-Hall Syndrome with renal malformation suggests a requirement for Hedgehog signaling during renal development. HH-dependent signaling increases levels of GLI transcriptional activators and decreases processing of GLI3 to a shorter transcriptional repressor. Previously, we showed that &lt;i&gt;Shh&lt;/i&gt;-deficiency interrupts early inductive events during renal development in a manner dependent on GLI3 repressor. Here we identify a novel function for GLI3 repressor in controlling nephron number. During renal morphogenesis, HH signaling activity, assayed by expression of &lt;i&gt;Ptc1-lacZ&lt;/i&gt;, is localized to ureteric cells of the medulla, but is undetectable in the cortex. Targeted inactivation of &lt;i&gt;Smo&lt;/i&gt;, the HH effector, in the ureteric cell lineage causes no detectable abnormality in renal morphogenesis. The functional significance of absent HH signaling activity in cortical ureteric cells was determined by targeted deletion of &lt;i&gt;Ptc1&lt;/i&gt;, the SMO inhibitor, in the ureteric cell lineage. &lt;i&gt;Ptc1&lt;sup&gt;−/−UB&lt;/sup&gt;&lt;/i&gt; mice demonstrate ectopic &lt;i&gt;Ptc1-lacZ&lt;/i&gt; expression in ureteric branch tips and renal hypoplasia characterized by reduced kidney size and a paucity of mature and intermediate nephrogenic structures. Ureteric tip cells are remarkable for abnormal morphology and impaired expression of &lt;i&gt;Ret&lt;/i&gt; and &lt;i&gt;Wnt11&lt;/i&gt;, markers of tip cell differentiation. A finding of renal hypoplasia in &lt;i&gt;Gli3&lt;/i&gt;&lt;sup&gt;−/−&lt;/sup&gt; mice suggests a pathogenic role for reduced GLI3 repressor in the &lt;i&gt;Ptc1&lt;sup&gt;−/−UB&lt;/sup&gt;&lt;/i&gt; mice. Indeed, constitutive expression of GLI3 repressor via the &lt;i&gt;Gli3&lt;sup&gt;Δ699&lt;/sup&gt;&lt;/i&gt; allele in &lt;i&gt;Ptc1&lt;sup&gt;−/−UB&lt;/sup&gt;&lt;/i&gt; mice restores the normal pattern of HH signaling, and expression of &lt;i&gt;Ret&lt;/i&gt; and &lt;i&gt;Wnt11&lt;/i&gt; and rescued the renal phenotype. Thus, GLI3 repressor controls nephron number by regulating ureteric tip cell expression of &lt;i&gt;Wnt11&lt;/i&gt; and &lt;i&gt;Ret&lt;/i&gt;.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Rhabdomyolysis in Community Acquired Bacterial Sepsis – A Retrospective Cohort Study</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007182" title="Rhabdomyolysis in Community Acquired Bacterial Sepsis – A Retrospective Cohort Study" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007182&amp;representation=XML" title="(XML) Rhabdomyolysis in Community Acquired Bacterial Sepsis – A Retrospective Cohort Study" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007182&amp;representation=PDF" title="(PDF) Rhabdomyolysis in Community Acquired Bacterial Sepsis – A Retrospective Cohort Study" />
    <author>
      <name>Anita A. Kumar et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007182</id>
    <updated>2009-09-29T07:00:00Z</updated>
    <published>2009-09-29T07:00:00Z</published>
    <content type="html">Background and Objectives

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Rhabdomyolysis is often associated with sepsis and gram positive bacterial pathogens are reported to be the most frequent cause of sepsis induced rhabdomyolysis. We report the pattern of infecting bacterial pathogens and associated causal factors in a South-Indian cohort.&lt;/p&gt;

Design, Setting, Participants &amp;amp; Measurements

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Retrospective cohort study of adult patients with community acquired bacterial sepsis complicated by rhabdomyolysis from March 2003 - August 2008. Rhabdomyolysis was defined as serum creatine kinase &amp;gt;2000 IU/L. The study population was divided into group-I (sepsis with gram positive pathogens), group–II (sepsis with gram negative pathogens) and group-III (culture negative sepsis).&lt;/p&gt;

Results

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;103 patients (group I -15, group II- 34 and group III- 54) formed the study cohort. Mean age was 55 years and two-third had diabetes. Mean creatine kinase was 7114 IU/L and mean serum creatinine on admission was 2.4 mg/dl. Causative pathogen of sepsis was identified in 47.5%. Gram negative pathogens were more frequently (33%) associated with rhabdomyolysis than gram positive pathogens (14.5%). Lung was the commonest foci of sepsis (38.8%). 78.6% of the study population had one or more additional causal factor for rhabdomyolysis like statin intake, chronic alcoholism, hypokalemia, hypernatremia and hypophosphatemia. Mortality was 59%.&lt;/p&gt;

Conclusions

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Gram negative bacterial pathogens were more frequently associated with rhabdomyolysis than gram positive pathogens. Rhabdomyolysis in patients with sepsis is multifactorial and is associated with high mortality.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Poly[ADP-Ribose] Polymerase-1 Expression Is Related To Cold Ischemia, Acute Tubular Necrosis, and Delayed Renal Function In Kidney Transplantation</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007138" title="Poly[ADP-Ribose] Polymerase-1 Expression Is Related To Cold Ischemia, Acute Tubular Necrosis, and Delayed Renal Function In Kidney Transplantation" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007138&amp;representation=PDF" title="(PDF) Poly[ADP-Ribose] Polymerase-1 Expression Is Related To Cold Ischemia, Acute Tubular Necrosis, and Delayed Renal Function In Kidney Transplantation" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007138&amp;representation=XML" title="(XML) Poly[ADP-Ribose] Polymerase-1 Expression Is Related To Cold Ischemia, Acute Tubular Necrosis, and Delayed Renal Function In Kidney Transplantation" />
    <author>
      <name>Francisco O'Valle et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007138</id>
    <updated>2009-09-28T07:00:00Z</updated>
    <published>2009-09-28T07:00:00Z</published>
    <content type="html">&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Cold ischemia time especially impacts on outcomes of expanded-criteria donor (ECD) transplantation. Ischemia-reperfusion (IR) injury produces excessive poly[ADP-Ribose] Polymerase-1 (PARP-1) activation. The present study explored the hypothesis that increased tubular expression of PARP-1 contributes to delayed renal function in suboptimal ECD kidney allografts and in non-ECD allografts that develop posttransplant acute tubular necrosis (ATN).&lt;/p&gt;

Materials and Methods

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Nuclear PARP-1 immunohistochemical expression was studied in 326 paraffin-embedded renal allograft biopsies (193 with different degrees of ATN and 133 controls) and in murine Parp-1 knockout model of IR injury.&lt;/p&gt;

Results

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;PARP-1 expression showed a significant relationship with cold ischemia time (r coefficient = 0.603), time to effective diuresis (r = 0.770), serum creatinine levels at biopsy (r = 0.649), and degree of ATN (r = 0.810) (p = 0.001, Pearson test). In the murine IR model, western blot showed an increase in PARP-1 that was blocked by Parp-1 inhibitor. Immunohistochemical study of PARP-1 in kidney allograft biopsies would allow early detection of possible delayed renal function, and the administration of PARP-1 inhibitors may offer a therapeutic option to reduce damage from IR in donor kidneys by preventing or minimizing ATN. In summary, these results suggest a pivotal role for PARP-1 in the ATN of renal transplantation. We propose the immunohistochemical assessment of PARP-1 in kidney allograft biopsies for early detection of a possible delayed renal function.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Down-Regulation of Platelet Surface CD47 Expression in &lt;italic&gt;Escherichia coli&lt;/italic&gt; O157:H7 Infection-Induced Thrombocytopenia</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007131" title="Down-Regulation of Platelet Surface CD47 Expression in &lt;italic&gt;Escherichia coli&lt;/italic&gt; O157:H7 Infection-Induced Thrombocytopenia" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007131&amp;representation=PDF" title="(PDF) Down-Regulation of Platelet Surface CD47 Expression in &lt;italic&gt;Escherichia coli&lt;/italic&gt; O157:H7 Infection-Induced Thrombocytopenia" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007131&amp;representation=XML" title="(XML) Down-Regulation of Platelet Surface CD47 Expression in &lt;italic&gt;Escherichia coli&lt;/italic&gt; O157:H7 Infection-Induced Thrombocytopenia" />
    <author>
      <name>Ya-Lan Guo et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007131</id>
    <updated>2009-09-22T07:00:00Z</updated>
    <published>2009-09-22T07:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Platelet depletion is a key feature of hemolytic uremic syndrome (HUS) caused by Shiga toxin-producing &lt;i&gt;Escherichia coli&lt;/i&gt; (STEC) infection. The mechanism underlying STEC-induced platelet depletion, however, is not completely understood.&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Here we demonstrated for the first time that platelet surface expression of CD47 was significantly decreased in C57BL6 mice treated with concentrated culture filtrates (CCF) from STEC O157:H7. STEC O157:H7 CCF treatment also led to a sharp drop of platelet counts. The reduction of cell surface CD47 was specific for platelets but not for neutrophil, monocytes and red blood cells. Down-regulation of platelet surface CD47 was also observed in isolated human platelets treated with O157:H7 CCF. Platelet surface CD47 reduction by O157:H7 CCF could be blocked by anti-TLR4 antibody but not anti-CD62 antibody. Down-regulation of platelet surface CD47 was positively correlated with platelet activation and phagocytosis by human monocyte-derived macrophages. Furthermore, the enhanced phagocytosis process of O157:H7 CCF-treated platelets was abolished by addition of soluble CD47 recombinants.&lt;/p&gt;

Conclusions/Significance

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Our results suggest that platelet CD47 down-regulation may be a novel mechanism underneath STEC-induced platelet depletion, and that the interactions between CD47 and its receptor, signal regulatory protein α (SIRPα), play an essential role in modulating platelet homeostasis.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Shiga Toxin and Lipopolysaccharide Induce Platelet-Leukocyte Aggregates and Tissue Factor Release, a Thrombotic Mechanism in Hemolytic Uremic Syndrome</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0006990" title="Shiga Toxin and Lipopolysaccharide Induce Platelet-Leukocyte Aggregates and Tissue Factor Release, a Thrombotic Mechanism in Hemolytic Uremic Syndrome" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0006990&amp;representation=PDF" title="(PDF) Shiga Toxin and Lipopolysaccharide Induce Platelet-Leukocyte Aggregates and Tissue Factor Release, a Thrombotic Mechanism in Hemolytic Uremic Syndrome" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0006990&amp;representation=XML" title="(XML) Shiga Toxin and Lipopolysaccharide Induce Platelet-Leukocyte Aggregates and Tissue Factor Release, a Thrombotic Mechanism in Hemolytic Uremic Syndrome" />
    <author>
      <name>Anne-lie Ståhl et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0006990</id>
    <updated>2009-09-11T07:00:00Z</updated>
    <published>2009-09-11T07:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Aggregates formed between leukocytes and platelets in the circulation lead to release of tissue factor (TF)–bearing microparticles contributing to a prothrombotic state. As enterohemorrhagic Escherichia coli (EHEC) may cause hemolytic uremic syndrome (HUS), in which microthrombi cause tissue damage, this study investigated whether the interaction between blood cells and EHEC virulence factors Shiga toxin (Stx) and lipopolysaccharide (LPS) led to release of TF.&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;The interaction between Stx or LPS and blood cells induced platelet-leukocyte aggregate formation and tissue factor (TF) release, as detected by flow cytometry in whole blood. O157LPS was more potent than other LPS serotypes. Aggregates formed mainly between monocytes and platelets and less so between neutrophils and platelets. Stimulated blood cells in complex expressed activation markers, and microparticles were released. Microparticles originated mainly from platelets and monocytes and expressed TF. TF–expressing microparticles, and functional TF in plasma, increased when blood cells were simultaneously exposed to the EHEC virulence factors and high shear stress. Stx and LPS in combination had a more pronounced effect on platelet-monocyte aggregate formation, and TF expression on these aggregates, than each virulence factor alone. Whole blood and plasma from HUS patients (n = 4) were analyzed. All patients had an increase in leukocyte-platelet aggregates, mainly between monocytes and platelets, on which TF was expressed during the acute phase of disease. Patients also exhibited an increase in microparticles, mainly originating from platelets and monocytes, bearing surface-bound TF, and functional TF was detected in their plasma. Blood cell aggregates, microparticles, and TF decreased upon recovery.&lt;/p&gt;

Conclusions/Significance

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;By triggering TF release in the circulation, Stx and LPS can induce a prothrombotic state contributing to the pathogenesis of HUS.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Expression of Stem Cell Markers in the Human Fetal Kidney</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0006709" title="Expression of Stem Cell Markers in the Human Fetal Kidney" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0006709&amp;representation=PDF" title="(PDF) Expression of Stem Cell Markers in the Human Fetal Kidney" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0006709&amp;representation=XML" title="(XML) Expression of Stem Cell Markers in the Human Fetal Kidney" />
    <author>
      <name>Sally Metsuyanim et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0006709</id>
    <updated>2009-08-21T07:00:00Z</updated>
    <published>2009-08-21T07:00:00Z</published>
    <content type="html">&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;In the human fetal kidney (HFK) self-renewing stem cells residing in the metanephric mesenchyme (MM)/blastema are induced to form all cell types of the nephron till 34&lt;sup&gt;th&lt;/sup&gt; week of gestation. Definition of useful markers is crucial for the identification of HFK stem cells. Because wilms' tumor, a pediatric renal cancer, initiates from retention of renal stem cells, we hypothesized that surface antigens previously up-regulated in microarrays of both HFK and blastema-enriched stem-like wilms' tumor xenografts (&lt;i&gt;NCAM, ACVRIIB, DLK1/PREF, GPR39, FZD7, FZD2, NTRK2&lt;/i&gt;) are likely to be relevant markers. Comprehensive profiling of these putative and of additional stem cell markers (&lt;i&gt;CD34, CD133, c-Kit, CD90, CD105, CD24&lt;/i&gt;) in mid-gestation HFK was performed using immunostaining and FACS in conjunction with EpCAM, an epithelial surface marker that is absent from the MM and increases along nephron differentiation and hence can be separated into negative, dim or bright fractions. No marker was specifically localized to the MM. Nevertheless, &lt;i&gt;FZD7&lt;/i&gt; and &lt;i&gt;NTRK2&lt;/i&gt; were preferentially localized to the MM and emerging tubules (&amp;lt;10% of HFK cells) and were mostly present within the &lt;i&gt;EpCAM&lt;sup&gt;neg&lt;/sup&gt;&lt;/i&gt; and &lt;i&gt;EpCAM&lt;sup&gt;dim&lt;/sup&gt;&lt;/i&gt; fractions, indicating putative stem/progenitor markers. In contrast, single markers such as &lt;i&gt;CD24&lt;/i&gt; and &lt;i&gt;CD133&lt;/i&gt; as well as double-positive &lt;i&gt;CD24&lt;sup&gt;+&lt;/sup&gt;CD133&lt;sup&gt;+&lt;/sup&gt;&lt;/i&gt; cells comprise &amp;gt;50% of HFK cells and predominantly co-express &lt;i&gt;EpCAM&lt;sup&gt;bright&lt;/sup&gt;&lt;/i&gt;, indicating they are mostly markers of differentiation. Furthermore, localization of NCAM exclusively in the MM and in its nephron progenitor derivatives but also in stroma and the expression pattern of significantly elevated renal stem/progenitor genes &lt;i&gt;Six2, Wt1, Cited1, and Sall1&lt;/i&gt; in NCAM&lt;sup&gt;+&lt;/sup&gt;EpCAM&lt;sup&gt;-&lt;/sup&gt; and to a lesser extent in NCAM&lt;sup&gt;+&lt;/sup&gt;EpCAM&lt;sup&gt;+&lt;/sup&gt; fractions confirmed regional identity of cells and assisted us in pinpointing the presence of subpopulations that are putative MM-derived progenitor cells (NCAM&lt;sup&gt;+&lt;/sup&gt;EpCAM&lt;sup&gt;+&lt;/sup&gt;FZD7&lt;sup&gt;+&lt;/sup&gt;), MM stem cells (NCAM&lt;sup&gt;+&lt;/sup&gt;EpCAM&lt;sup&gt;-&lt;/sup&gt;FZD7&lt;sup&gt;+&lt;/sup&gt;) or both (NCAM&lt;sup&gt;+&lt;/sup&gt;FZD7&lt;sup&gt;+&lt;/sup&gt;). These results and concepts provide a framework for developing cell selection strategies for human renal cell-based therapies.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Restoration of Podocyte Structure and Improvement of Chronic Renal Disease in Transgenic Mice Overexpressing Renin</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0006721" title="Restoration of Podocyte Structure and Improvement of Chronic Renal Disease in Transgenic Mice Overexpressing Renin" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0006721&amp;representation=XML" title="(XML) Restoration of Podocyte Structure and Improvement of Chronic Renal Disease in Transgenic Mice Overexpressing Renin" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0006721&amp;representation=PDF" title="(PDF) Restoration of Podocyte Structure and Improvement of Chronic Renal Disease in Transgenic Mice Overexpressing Renin" />
    <author>
      <name>Anne-Cécile Huby et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0006721</id>
    <updated>2009-08-21T07:00:00Z</updated>
    <published>2009-08-21T07:00:00Z</published>
    <content type="html">Background

            &lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Proteinuria is a major marker of the decline of renal function and an important risk factor of coronary heart disease. Elevated proteinuria is associated to the disruption of slit-diaphragm and loss of podocyte foot processes, structural alterations that are considered irreversible. The objective of the present study was to investigate whether proteinuria can be reversed and to identify the structural modifications and the gene/protein regulation associated to this reversal.&lt;/p&gt;
         
         
            Methodology/Principal Findings

            &lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt; We used a novel transgenic strain of mouse (RenTg) that overexpresses renin at a constant high level. At the age of 12-month, RenTg mice showed established lesions typical of chronic renal disease such as peri-vascular and periglomerular inflammation, glomerular ischemia, glomerulosclerosis, mesangial expansion and tubular dilation. Ultrastructural analysis indicated abnormal heterogeneity of basement membrane thickness and disappearance of podocyte foot processes. These structural alterations were accompanied by decreased expressions of proteins specific of podocyte (nephrin, podocin), or tubular epithelial cell (E-cadherin and megalin) integrity. In addition, since TGFβ is considered the major pro-fibrotic agent in renal disease and since exogenous administration of BMP7 is reported to antagonize the TGFβ-induced phenotype changes in kidney, we have screened the expressions of several genes belonging in the TGFβ/BMP superfamily. We found that the endogenous inhibitors of BMPs such as noggin and Usag-1 were several-fold activated inhibiting the action of BMPs and thus reinforcing the deleterious action of TGFβ.Treatment with an AT1 receptor antagonist, at dose that did not decrease arterial pressure, gradually reduced albuminuria. This decrease was accompanied by re-expression of podocin, nephrin, E-cadherin and megalin, and reappearance of podocyte foot processes. In addition, expressions of noggin and Usag-1 were markedly decreased, permitting thus activation of the beneficial action of BMPs.&lt;/p&gt;
         
         
            Conclusions/Significance

            &lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt; These findings show that proteinuria and alterations in the expression of proteins involved in the integrity and function of glomerular and renal epithelial phenotype are reversible events when the local action of angiotensin II is blocked, and provide hope that chronic renal disease can be efficiently treated.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>A Nanoconjugate Apaf-1 Inhibitor Protects Mesothelial Cells from Cytokine-Induced Injury</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0006634" title="A Nanoconjugate Apaf-1 Inhibitor Protects Mesothelial Cells from Cytokine-Induced Injury" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0006634&amp;representation=PDF" title="(PDF) A Nanoconjugate Apaf-1 Inhibitor Protects Mesothelial Cells from Cytokine-Induced Injury" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0006634&amp;representation=XML" title="(XML) A Nanoconjugate Apaf-1 Inhibitor Protects Mesothelial Cells from Cytokine-Induced Injury" />
    <author>
      <name>Beatriz Santamaría et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0006634</id>
    <updated>2009-08-13T07:00:00Z</updated>
    <published>2009-08-13T07:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Inflammation may lead to tissue injury. We have studied the modulation of inflammatory milieu-induced tissue injury, as exemplified by the mesothelium. Peritoneal dialysis is complicated by peritonitis episodes that cause loss of mesothelium. Proinflammatory cytokines are increased in the peritoneal cavity during peritonitis episodes. However there is scarce information on the modulation of cell death by combinations of cytokines and on the therapeutic targets to prevent desmesothelization.&lt;/p&gt;

Methodology

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Human mesothelial cells were cultured from effluents of stable peritoneal dialysis patients and from omentum of non-dialysis patients. Mesothelial cell death was studied in mice with &lt;i&gt;S. aureus&lt;/i&gt; peritonitis and in mice injected with tumor necrosis factor alpha and interferon gamma.&lt;/p&gt;
&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Tumor necrosis factor alpha and interferon gamma alone do not induce apoptosis in cultured mesothelial cells. By contrast, the cytokine combination increased the rate of apoptosis 2 to 3-fold over control. Cell death was associated with the activation of caspases and a pancaspase inhibitor prevented apoptosis. Specific caspase-8 and caspase-3 inhibitors were similarly effective. Co-incubation with both cytokines also impaired mesothelial wound healing in an in vitro model. However, inhibition of caspases did not improve wound healing and even impaired the long-term recovery from injury. By contrast, a polymeric nanoconjugate Apaf-1 inhibitor protected from apoptosis and allowed wound healing and long-term recovery. The Apaf-1 inhibitor also protected mesothelial cells from inflammation-induced injury in vivo in mice.&lt;/p&gt;

Conclusion

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Cooperation between tumor necrosis factor alpha and interferon gamma contributes to mesothelial injury and impairs the regenerative capacity of the monolayer. Caspase inhibition attenuates mesothelial cell apoptosis but does not facilitate regeneration. A drug targeting Apaf-1 allows protection from apoptosis as well as regeneration in the course of inflammation-induced tissue injury.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Polycystic Kidney Disease in the Medaka (&lt;italic&gt;Oryzias latipes&lt;/italic&gt;) pc Mutant Caused by a Mutation in the Gli-Similar3 (glis3) Gene</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0006299" title="Polycystic Kidney Disease in the Medaka (&lt;italic&gt;Oryzias latipes&lt;/italic&gt;) pc Mutant Caused by a Mutation in the Gli-Similar3 (glis3) Gene" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0006299&amp;representation=PDF" title="(PDF) Polycystic Kidney Disease in the Medaka (&lt;italic&gt;Oryzias latipes&lt;/italic&gt;) pc Mutant Caused by a Mutation in the Gli-Similar3 (glis3) Gene" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0006299&amp;representation=XML" title="(XML) Polycystic Kidney Disease in the Medaka (&lt;italic&gt;Oryzias latipes&lt;/italic&gt;) pc Mutant Caused by a Mutation in the Gli-Similar3 (glis3) Gene" />
    <author>
      <name>Hisashi Hashimoto et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0006299</id>
    <updated>2009-07-17T07:00:00Z</updated>
    <published>2009-07-17T07:00:00Z</published>
    <content type="html">&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Polycystic kidney disease (PKD) is a common hereditary disease in humans. Recent studies have shown an increasing number of ciliary genes that are involved in the pathogenesis of PKD. In this study, the Gli-similar3 (&lt;i&gt;glis3&lt;/i&gt;) gene was identified as the causal gene of the medaka pc mutant, a model of PKD. In the pc mutant, a transposon was found to be inserted into the fourth intron of the &lt;i&gt;pc/glis3&lt;/i&gt; gene, causing aberrant splicing of the &lt;i&gt;pc/glis3&lt;/i&gt; mRNA and thus a putatively truncated protein with a defective zinc finger domain. &lt;i&gt;pc/glis3&lt;/i&gt; mRNA is expressed in the epithelial cells of the renal tubules and ducts of the pronephros and mesonephros, and also in the pancreas. Antisense oligonucleotide-mediated knockdown of &lt;i&gt;pc/glis3&lt;/i&gt; resulted in cyst formation in the pronephric tubules of medaka fry. Although three other &lt;i&gt;glis&lt;/i&gt; family members, &lt;i&gt;glis1a&lt;/i&gt;, &lt;i&gt;glis1b&lt;/i&gt; and &lt;i&gt;glis2&lt;/i&gt;, were found in the medaka genome, none were expressed in the embryonic or larval kidney. In the pc mutant, the urine flow rate in the pronephros was significantly reduced, which was considered to be a direct cause of renal cyst formation. The cilia on the surface of the renal tubular epithelium were significantly shorter in the pc mutant than in wild-type, suggesting that shortened cilia resulted in a decrease in driving force and, in turn, a reduction in urine flow rate. Most importantly, EGFP-tagged pc/glis3 protein localized in primary cilia as well as in the nucleus when expressed in mouse renal epithelial cells, indicating a strong connection between pc/glis3 and ciliary function. Unlike human patients with &lt;i&gt;GLIS3&lt;/i&gt; mutations, the medaka pc mutant shows none of the symptoms of a pancreatic phenotype, such as impaired insulin expression and/or diabetes, suggesting that the pc mutant may be suitable for use as a kidney-specific model for human &lt;i&gt;GLIS3&lt;/i&gt; patients.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Biomarkers for Early and Late Stage Chronic Allograft Nephropathy by Proteogenomic Profiling of Peripheral Blood</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0006212" title="Biomarkers for Early and Late Stage Chronic Allograft Nephropathy by Proteogenomic Profiling of Peripheral Blood" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0006212&amp;representation=PDF" title="(PDF) Biomarkers for Early and Late Stage Chronic Allograft Nephropathy by Proteogenomic Profiling of Peripheral Blood" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0006212&amp;representation=XML" title="(XML) Biomarkers for Early and Late Stage Chronic Allograft Nephropathy by Proteogenomic Profiling of Peripheral Blood" />
    <author>
      <name>Sunil M. Kurian et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0006212</id>
    <updated>2009-07-10T07:00:00Z</updated>
    <published>2009-07-10T07:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Despite significant improvements in life expectancy of kidney transplant patients due to advances in surgery and immunosuppression, Chronic Allograft Nephropathy (CAN) remains a daunting problem. A complex network of cellular mechanisms in both graft and peripheral immune compartments complicates the non-invasive diagnosis of CAN, which still requires biopsy histology. This is compounded by non-immunological factors contributing to graft injury. There is a pressing need to identify and validate minimally invasive biomarkers for CAN to serve as early predictors of graft loss and as metrics for managing long-term immunosuppression.&lt;/p&gt;

Methods

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;We used DNA microarrays, tandem mass spectroscopy proteomics and bioinformatics to identify genomic and proteomic markers of mild and moderate/severe CAN in peripheral blood of two distinct cohorts (n = 77 total) of kidney transplant patients with biopsy-documented histology.&lt;/p&gt;

Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Gene expression profiles reveal over 2400 genes for mild CAN, and over 700 for moderate/severe CAN. A consensus analysis reveals 393 (mild) and 63 (moderate/severe) final candidates as CAN markers with predictive accuracy of 80% (mild) and 92% (moderate/severe). Proteomic profiles show over 500 candidates each, for both stages of CAN including 302 proteins unique to mild and 509 unique to moderate/severe CAN.&lt;/p&gt;

Conclusions

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;This study identifies several unique signatures of transcript and protein biomarkers with high predictive accuracies for mild and moderate/severe CAN, the most common cause of late allograft failure. These biomarkers are the necessary first step to a proteogenomic classification of CAN based on peripheral blood profiling and will be the targets of a prospective clinical validation study.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Linoleic Acid-Induced Mitochondrial Ca&lt;sup&gt;2+&lt;/sup&gt; Efflux Causes Peroxynitrite Generation and Protein Nitrotyrosylation</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0006048" title="Linoleic Acid-Induced Mitochondrial Ca&lt;sup&gt;2+&lt;/sup&gt; Efflux Causes Peroxynitrite Generation and Protein Nitrotyrosylation" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0006048&amp;representation=XML" title="(XML) Linoleic Acid-Induced Mitochondrial Ca&lt;sup&gt;2+&lt;/sup&gt; Efflux Causes Peroxynitrite Generation and Protein Nitrotyrosylation" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0006048&amp;representation=PDF" title="(PDF) Linoleic Acid-Induced Mitochondrial Ca&lt;sup&gt;2+&lt;/sup&gt; Efflux Causes Peroxynitrite Generation and Protein Nitrotyrosylation" />
    <author>
      <name>Hong-Mei Zhang et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0006048</id>
    <updated>2009-06-26T07:00:00Z</updated>
    <published>2009-06-26T07:00:00Z</published>
    <content type="html">&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;It is well known that excessive non-esterified fatty acids in diabetes contribute to the pathogenesis of renal complications although the mechanism remains elusive. Enhanced oxidative stress has been hypothesized as a unified factor contributing to diabetic complications and increased protein nitrotyrosylation has been reported in the kidneys of diabetic patients. In the current manuscript we described that linoleic acid (LA) caused mitochondrial Ca&lt;sup&gt;2+&lt;/sup&gt; efflux and peroxynitrite production, along with increased nitrotyrosine levels of cellular proteins in primary human mesangial cells. The peroxynitrite production by LA was found to depend on mitochondrial Ca&lt;sup&gt;2+&lt;/sup&gt; efflux. Downregulation of hsp90β1, which has been previously shown to be essential for polyunsaturated fatty acid-induced mitochondrial Ca&lt;sup&gt;2+&lt;/sup&gt; efflux, significantly diminished LA-responsive mitochondrial Ca&lt;sup&gt;2+&lt;/sup&gt; efflux and the coupled peroxynitrite generation, implicating a critical role of hsp90β1 in the LA responses. Our results further demonstrated that mitochondrial complexes I and III were directly involved in the LA-induced peroxynitrite generation. Using the well established type 2 diabetic animal model db/db mice, we observed a dramatically enhanced LA responsive mitochondrial Ca&lt;sup&gt;2+&lt;/sup&gt; efflux and protein nitrotyrosylation in the kidney. Our study thus demonstrates a cause-effect relationship between LA and peroxynitrite or protein nitrotyrosylation and provides a novel mechanism for lipid-induced nephropathy in diabetes.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Ligation of α-Dystroglycan on Podocytes Induces Intracellular Signaling: A New Mechanism for Podocyte Effacement?</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0005979" title="Ligation of α-Dystroglycan on Podocytes Induces Intracellular Signaling: A New Mechanism for Podocyte Effacement?" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0005979&amp;representation=PDF" title="(PDF) Ligation of α-Dystroglycan on Podocytes Induces Intracellular Signaling: A New Mechanism for Podocyte Effacement?" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0005979&amp;representation=XML" title="(XML) Ligation of α-Dystroglycan on Podocytes Induces Intracellular Signaling: A New Mechanism for Podocyte Effacement?" />
    <author>
      <name>Nils P. J. Vogtländer et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0005979</id>
    <updated>2009-06-19T07:00:00Z</updated>
    <published>2009-06-19T07:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;α-Dystroglycan is a negatively charged glycoprotein that covers the apical and basolateral membrane of the podocyte. Its transmembrane binding to the cytoskeleton is regulated via tyrosine phosphorylation (pY892) of β-dystroglycan. At the basolateral side α-dystroglycan binds the glomerular basement membrane. At the apical membrane, it plays a role in the maintenance of the filtration slit. In this study, we evaluated whether ligation of α-dystroglycan with specific antibodies or natural ligands induces intracellular signaling, and whether there is an effect on podocyte architecture.&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Conditionally immortalized podocytes were exposed &lt;i&gt;in vitro&lt;/i&gt; to antibodies to α-dystroglycan, and to fibronectin, biglycan, laminin and agrin. Intracellular calcium fluxes, phosphorylation of β-dystroglycan and podocyte architecture were studied. Antibodies to α-dystroglycan could specifically induce calcium signaling. Fibronectin also induced calcium signaling, and led to dephosphorylation of pY892 in β-dystroglycan. Ligation of α-dystroglycan resulted in an altered actin architecture, a decreased number of podocyte pedicles and a more flattened appearance of the podocyte.&lt;/p&gt;

Conclusions/Significance

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;We conclude that ligation of α-dystroglycan on podocytes induces intracellular calcium signaling, which leads to an altered cytoskeleton architecture akin to the situation of foot process effacement. In particular the ability of fibronectin to induce intracellular signaling events is of interest, since the expression and excretion of this protein is upregulated in several proteinuric diseases. Therefore, fibronectin-induced signaling via dystroglycan may be a novel mechanism for foot process effacement in proteinuric diseases.&lt;/p&gt;</content>
  </entry>
</feed>
