<?xml version="1.0" encoding="UTF-8"?>
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  <title>PLoS ONE - Category Diabetes and Endocrinology</title>
  <link rel="self" href="http://www.plosone.org/" title="PLoS ONE" />
  <author>
    <name>PLoS</name>
    <uri>http://www.plosone.org/</uri>
    <email>webmaster@plos.org</email>
  </author>
  <subtitle>Publishing science</subtitle>
  <id>info:doi/10.1371/feed.pone?category=Diabetes and Endocrinology</id>
  <rights>This work is licensed under a Creative Commons Attribution-Share Alike 3.0 License</rights>
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  <logo>${webserver-url}images/favicon.ico</logo>
  <updated>2009-11-22T06:12:57Z</updated>
  <entry>
    <title>Absence of ERRα in Female Mice Confers Resistance to Bone Loss Induced by Age or Estrogen-Deficiency</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007942" title="Absence of ERRα in Female Mice Confers Resistance to Bone Loss Induced by Age or Estrogen-Deficiency" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007942&amp;representation=XML" title="(XML) Absence of ERRα in Female Mice Confers Resistance to Bone Loss Induced by Age or Estrogen-Deficiency" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007942&amp;representation=PDF" title="(PDF) Absence of ERRα in Female Mice Confers Resistance to Bone Loss Induced by Age or Estrogen-Deficiency" />
    <author>
      <name>Catherine Teyssier et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007942</id>
    <updated>2009-11-20T08:00:00Z</updated>
    <published>2009-11-20T08:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;ERRα is an orphan member of the nuclear hormone receptor superfamily, which acts as a transcription factor and is involved in various metabolic processes. ERRα is also highly expressed in ossification zones during mouse development as well as in human bones and cell lines. Previous data have shown that this receptor up-modulates the expression of osteopontin, which acts as an inhibitor of bone mineralization and whose absence results in resistance to ovariectomy-induced bone loss. Altogether this suggests that ERRα may negatively regulate bone mass and could impact on bone fragility that occurs in the absence of estrogens.&lt;/p&gt;

Methods/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;In this report, we have determined the &lt;i&gt;in vivo&lt;/i&gt; effect of ERRα on bone, using knock-out mice. Relative to wild type animals, female ERRαKO bones do not age and are resistant to bone loss induced by estrogen-withdrawal. Strikingly male ERRαKO mice are indistinguishable from their wild type counterparts, both at the unchallenged or gonadectomized state. Using primary cell cultures originating from ERRαKO bone marrow, we also show that ERRα acts as an inhibitor of osteoblast differentiation.&lt;/p&gt;

Conclusion/Significance

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Down-regulating ERRα could thus be beneficial against osteoporosis.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Metabolite Profiling Identifies Candidate Markers Reflecting the Clinical Adaptations Associated with Roux-en-Y Gastric Bypass Surgery</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007905" title="Metabolite Profiling Identifies Candidate Markers Reflecting the Clinical Adaptations Associated with Roux-en-Y Gastric Bypass Surgery" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007905&amp;representation=XML" title="(XML) Metabolite Profiling Identifies Candidate Markers Reflecting the Clinical Adaptations Associated with Roux-en-Y Gastric Bypass Surgery" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007905&amp;representation=PDF" title="(PDF) Metabolite Profiling Identifies Candidate Markers Reflecting the Clinical Adaptations Associated with Roux-en-Y Gastric Bypass Surgery" />
    <author>
      <name>David M. Mutch et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007905</id>
    <updated>2009-11-19T08:00:00Z</updated>
    <published>2009-11-19T08:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Roux-en-Y gastric bypass (RYGB) surgery is associated with weight loss, improved insulin sensitivity and glucose homeostasis, and a reduction in co-morbidities such as diabetes and coronary heart disease. To generate further insight into the numerous metabolic adaptations associated with RYGB surgery, we profiled serum metabolites before and after gastric bypass surgery and integrated metabolite changes with clinical data.&lt;/p&gt;

Methodology and Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Serum metabolites were detected by gas and liquid chromatography-coupled mass spectrometry before, and 3 and 6 months after RYGB in morbidly obese female subjects (n = 14; BMI = 46.2±1.7). Subjects showed decreases in weight-related parameters and improvements in insulin sensitivity post surgery. The abundance of 48% (83 of 172) of the measured metabolites changed significantly within the first 3 months post RYGB (p&amp;lt;0.05), including sphingosines, unsaturated fatty acids, and branched chain amino acids. Dividing subjects into obese (n = 9) and obese/diabetic (n = 5) groups identified 8 metabolites that differed consistently at all time points and whose serum levels changed following RYGB: asparagine, lysophosphatidylcholine (C18:2), nervonic (C24:1) acid, p-Cresol sulfate, lactate, lycopene, glucose, and mannose. Changes in the aforementioned metabolites were integrated with clinical data for body mass index (BMI) and estimates for insulin resistance (HOMA-IR). Of these, nervonic acid was significantly and negatively correlated with HOMA-IR (p = 0.001, R = −0.55).&lt;/p&gt;

Conclusions

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Global metabolite profiling in morbidly obese subjects after RYGB has provided new information regarding the considerable metabolic alterations associated with this surgical procedure. Integrating clinical measurements with metabolomics data is capable of identifying markers that reflect the metabolic adaptations following RYGB.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Experimental Diabetes Mellitus Exacerbates Tau Pathology in a Transgenic Mouse Model of Alzheimer's Disease</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007917" title="Experimental Diabetes Mellitus Exacerbates Tau Pathology in a Transgenic Mouse Model of Alzheimer's Disease" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007917&amp;representation=XML" title="(XML) Experimental Diabetes Mellitus Exacerbates Tau Pathology in a Transgenic Mouse Model of Alzheimer's Disease" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007917&amp;representation=PDF" title="(PDF) Experimental Diabetes Mellitus Exacerbates Tau Pathology in a Transgenic Mouse Model of Alzheimer's Disease" />
    <author>
      <name>Yazi D. Ke et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007917</id>
    <updated>2009-11-19T08:00:00Z</updated>
    <published>2009-11-19T08:00:00Z</published>
    <content type="html">&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Diabetes mellitus (DM) is characterized by hyperglycemia caused by a lack of insulin, insulin resistance, or both. There is increasing evidence that insulin also plays a role in Alzheimer's disease (AD) as it is involved in the metabolism of β-amyloid (Aβ) and tau, two proteins that form Aβ plaques and neurofibrillary tangles (NFTs), respectively, the hallmark lesions in AD. Here, we examined the effects of experimental DM on a pre-existing tau pathology in the pR5 transgenic mouse strain that is characterized by NFTs. pR5 mice express P301L mutant human tau that is associated with dementia. Experimental DM was induced by administration of streptozotocin (STZ), which causes insulin deficiency. We determined phosphorylation of tau, using immunohistochemistry and Western blotting. Solubility of tau was determined upon extraction with sarkosyl and formic acid, and Gallyas silver staining was employed to reveal NFTs. Insulin depletion by STZ administration in six months-old non-transgenic mice causes increased tau phosphorylation, without its deposition or NFT formation. In contrast, in pR5 mice this results in massive deposition of hyperphosphorylated, insoluble tau. Furthermore, they develop a pronounced tau-histopathology, including NFTs at this early age, while the pathology in sham-treated pR5 mice is moderate. Whereas experimental DM did not result in deposition of hyperphosphorylated tau in non-transgenic mice, a predisposition to develop a tau pathology in young pR5 mice was both sufficient and necessary to exacerbate tau deposition and NFT formation. Hence, DM can accelerate onset and increase severity of disease in individuals with a predisposition to developing tau pathology.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>TCF7L2 Polymorphism rs7903146 Is Associated with Coronary Artery Disease Severity and Mortality</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007697" title="TCF7L2 Polymorphism rs7903146 Is Associated with Coronary Artery Disease Severity and Mortality" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007697&amp;representation=PDF" title="(PDF) TCF7L2 Polymorphism rs7903146 Is Associated with Coronary Artery Disease Severity and Mortality" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007697&amp;representation=XML" title="(XML) TCF7L2 Polymorphism rs7903146 Is Associated with Coronary Artery Disease Severity and Mortality" />
    <author>
      <name>André Gustavo P. Sousa et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007697</id>
    <updated>2009-11-17T08:00:00Z</updated>
    <published>2009-11-17T08:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;TCF7L2 polymorphisms have been consistently associated with type 2 diabetes mellitus in different populations and type 2 diabetes mellitus is a major risk factor for cardiovascular disease, especially coronary artery disease. This study aimed to evaluate the association between TCF7L2 polymorphism rs7903146 and coronary artery disease in diabetic and non-diabetic subjects.&lt;/p&gt;

Methods and Results

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;two populations were studied in order to assess severity of coronary artery disease and cardiovascular events incidence. Eight-hundred and eighty nine subjects who were referred for cardiac catheterization for coronary artery disease diagnosis were cross-sectionally evaluated for coronary lesions (atherosclerotic burden) and 559 subjects from the MASS-II Trial were prospectively followed-up for 5 years and assessed for major cardiovascular events incidence. As expected, rs7903146 T allele was associated with diabetes. Although diabetic patients had a higher prevalence of coronary lesions, no association between TCF7L2 genotype and coronary lesions was found in this subgroup. However, non-diabetic individuals carrying the T allele were associated with a significantly higher frequency of coronary lesions than non-diabetic non-carriers of the risk allele (adjusted OR  = 2.32 95%CI 1.27–4.24, p = 0.006). Moreover, presence of multi-vessel coronary artery disease was also associated with the CT or TT genotypes in non-diabetics. Similarly, from the prospective sample analysis, non-diabetics carrying the CT/TT genotypes had significantly more composite cardiovascular end-points events than CC carriers (p = 0.049), mainly due to an increased incidence of death (p = 0.004).&lt;/p&gt;

Conclusions

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;rs7903146 T allele is associated with diabetes and, in non-diabetic individuals, with a higher prevalence and severity of coronary artery disease and cardiovascular events. name of registry site (see list below), registration number, trial registration URL in brackets.&lt;/p&gt;

Clinical Trial Registration Information

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Medicine, Angioplasty, or Surgery Study (MASS II): &lt;a href="http://www.controlledtrials.com."&gt;&lt;/a&gt;Unique identifier: ISRCTN66068876.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Immunoproteasome Overexpression Underlies the Pathogenesis of Thyroid Oncocytes and Primary Hypothyroidism: Studies in Humans and Mice</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007857" title="Immunoproteasome Overexpression Underlies the Pathogenesis of Thyroid Oncocytes and Primary Hypothyroidism: Studies in Humans and Mice" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007857&amp;representation=PDF" title="(PDF) Immunoproteasome Overexpression Underlies the Pathogenesis of Thyroid Oncocytes and Primary Hypothyroidism: Studies in Humans and Mice" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007857&amp;representation=XML" title="(XML) Immunoproteasome Overexpression Underlies the Pathogenesis of Thyroid Oncocytes and Primary Hypothyroidism: Studies in Humans and Mice" />
    <author>
      <name>Hiroaki J. Kimura et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007857</id>
    <updated>2009-11-17T08:00:00Z</updated>
    <published>2009-11-17T08:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Oncocytes of the thyroid gland (Hürthle cells) are found in tumors and autoimmune diseases. They have a unique appearance characterized by abundant granular eosinophilic cytoplasm and hyperchromatic nucleus. Their pathogenesis has remained, thus far, unknown.&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Using transgenic mice chronically expressing IFNγ in thyroid gland, we showed changes in the thyroid follicular epithelium reminiscent of the human oncocyte. Transcriptome analysis comparing transgenic to wild type thyrocytes revealed increased levels of immunoproteasome subunits like LMP2 in transgenics, suggesting an important role of the immunoproteasome in oncocyte pathogenesis. Pharmacologic blockade of the proteasome, in fact, ameliorated the oncocytic phenotype. Genetic deletion of LMP2 subunit prevented the development of the oncocytic phenotype and primary hypothyroidism. LMP2 was also found expressed in oncocytes from patients with Hashimoto thyroiditis and Hürthle cell tumors.&lt;/p&gt;

Conclusions/Significance

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;In summary, we report that oncocytes are the result of an increased immunoproteasome expression secondary to a chronic inflammatory milieu, and suggest LMP2 as a novel therapeutic target for the treatment of oncocytic lesions and autoimmune hypothyroidism.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Control of TCF-4 Expression by VDR and Vitamin D in the Mouse Mammary Gland and Colorectal Cancer Cell Lines</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007872" title="Control of TCF-4 Expression by VDR and Vitamin D in the Mouse Mammary Gland and Colorectal Cancer Cell Lines" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007872&amp;representation=XML" title="(XML) Control of TCF-4 Expression by VDR and Vitamin D in the Mouse Mammary Gland and Colorectal Cancer Cell Lines" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007872&amp;representation=PDF" title="(PDF) Control of TCF-4 Expression by VDR and Vitamin D in the Mouse Mammary Gland and Colorectal Cancer Cell Lines" />
    <author>
      <name>Marcy E. Beildeck et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007872</id>
    <updated>2009-11-17T08:00:00Z</updated>
    <published>2009-11-17T08:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;The vitamin D receptor (VDR) pathway is important in the prevention and potentially in the treatment of many cancers. One important mechanism of VDR action is related to its interaction with the Wnt/β-catenin pathway. Agonist-bound VDR inhibits the oncogenic Wnt/β-catenin/TCF pathway by interacting directly with β-catenin and in some cells by increasing cadherin expression which, in turn, recruits β-catenin to the membrane. Here we identify TCF-4, a transcriptional regulator and β-catenin binding partner as an indirect target of the VDR pathway.&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;In this work, we show that TCF-4 (gene name TCF7L2) is decreased in the mammary gland of the VDR knockout mouse as compared to the wild-type mouse. Furthermore, we show 1,25(OH)&lt;sub&gt;2&lt;/sub&gt;D&lt;sub&gt;3&lt;/sub&gt; increases TCF-4 at the RNA and protein levels in several human colorectal cancer cell lines, the effect of which is completely dependent on the VDR. &lt;i&gt;In silico&lt;/i&gt; analysis of the human and mouse TCF7L2 promoters identified several putative VDR binding elements. Although TCF7L2 promoter reporters responded to exogenous VDR, and 1,25(OH)&lt;sub&gt;2&lt;/sub&gt;D&lt;sub&gt;3&lt;/sub&gt;, mutation analysis and chromatin immunoprecipitation assays, showed that the increase in TCF7L2 did not require recruitment of the VDR to the identified elements and indicates that the regulation by VDR is indirect. This is further confirmed by the requirement of &lt;i&gt;de novo&lt;/i&gt; protein synthesis for this up-regulation.&lt;/p&gt;

Conclusions/Significance

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Although it is generally assumed that binding of β-catenin to members of the TCF/LEF family is cancer-promoting, recent studies have indicated that TCF-4 functions instead as a transcriptional repressor that restricts breast and colorectal cancer cell growth. Consequently, we conclude that the 1,25(OH)&lt;sub&gt;2&lt;/sub&gt;D&lt;sub&gt;3&lt;/sub&gt;/VDR-mediated increase in TCF-4 may have a protective role in colon cancer as well as diabetes and Crohn's disease.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Species-Specific Differences in the Expression of the &lt;italic&gt;HNF1A&lt;/italic&gt;, &lt;italic&gt;HNF1B&lt;/italic&gt; and &lt;italic&gt;HNF4A&lt;/italic&gt; Genes</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007855" title="Species-Specific Differences in the Expression of the &lt;italic&gt;HNF1A&lt;/italic&gt;, &lt;italic&gt;HNF1B&lt;/italic&gt; and &lt;italic&gt;HNF4A&lt;/italic&gt; Genes" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007855&amp;representation=XML" title="(XML) Species-Specific Differences in the Expression of the &lt;italic&gt;HNF1A&lt;/italic&gt;, &lt;italic&gt;HNF1B&lt;/italic&gt; and &lt;italic&gt;HNF4A&lt;/italic&gt; Genes" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007855&amp;representation=PDF" title="(PDF) Species-Specific Differences in the Expression of the &lt;italic&gt;HNF1A&lt;/italic&gt;, &lt;italic&gt;HNF1B&lt;/italic&gt; and &lt;italic&gt;HNF4A&lt;/italic&gt; Genes" />
    <author>
      <name>Lorna W. Harries et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007855</id>
    <updated>2009-11-16T08:00:00Z</updated>
    <published>2009-11-16T08:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;The &lt;i&gt;HNF1A&lt;/i&gt;, &lt;i&gt;HNF1B&lt;/i&gt; and &lt;i&gt;HNF4A&lt;/i&gt; genes are part of an autoregulatory network in mammalian pancreas, liver, kidney and gut. The layout of this network appears to be similar in rodents and humans, but inactivation of &lt;i&gt;HNF1A&lt;/i&gt;, &lt;i&gt;HNF1B&lt;/i&gt; or &lt;i&gt;HNF4A&lt;/i&gt; genes in animal models cause divergent phenotypes to those seen in man. We hypothesised that some differences may arise from variation in the expression profile of alternatively processed isoforms between species.&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;We measured the expression of the major isoforms of the &lt;i&gt;HNF1A&lt;/i&gt;, &lt;i&gt;HNF1B&lt;/i&gt; and &lt;i&gt;HNF4A&lt;/i&gt; genes in human and rodent pancreas, islet, liver and kidney by isoform-specific quantitative real-time PCR and compared their expression by the comparative Ct (ΔΔCt) method. We found major changes in the expression profiles of the HNF genes between humans and rodents. The principal difference lies in the expression of the &lt;i&gt;HNF1A&lt;/i&gt; gene, which exists as three isoforms in man, but as a single isoform only in rodents. More subtle changes were to the balance of &lt;i&gt;HNF1B&lt;/i&gt; and &lt;i&gt;HNF4A&lt;/i&gt; isoforms between species; the repressor isoform &lt;i&gt;HNF1B(C)&lt;/i&gt; comprised only 6% in human islets compared with 24–26% in rodents (p = 0.006) whereas &lt;i&gt;HNF4A9&lt;/i&gt; comprised 22% of &lt;i&gt;HNF4A&lt;/i&gt; expression in human pancreas but only 11% in rodents (p = 0.001).&lt;/p&gt;

Conclusions/Significance

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;The differences we note in the isoform-specific expression of the human and rodent &lt;i&gt;HNF1A&lt;/i&gt;, &lt;i&gt;HNF1B&lt;/i&gt; and &lt;i&gt;HNF4A&lt;/i&gt; genes may impact on the absolute activity of these genes, and therefore on the activity of the pancreatic transcription factor network as a whole. We conclude that alterations to expression of &lt;i&gt;HNF&lt;/i&gt; isoforms may underlie some of the phenotypic variation caused by mutations in these genes.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Gene Expression Profiling in the Type 1 Diabetes Rat Diaphragm</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007832" title="Gene Expression Profiling in the Type 1 Diabetes Rat Diaphragm" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007832&amp;representation=PDF" title="(PDF) Gene Expression Profiling in the Type 1 Diabetes Rat Diaphragm" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007832&amp;representation=XML" title="(XML) Gene Expression Profiling in the Type 1 Diabetes Rat Diaphragm" />
    <author>
      <name>Erik van Lunteren et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007832</id>
    <updated>2009-11-13T08:00:00Z</updated>
    <published>2009-11-13T08:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Respiratory muscle contractile performance is impaired by diabetes, mechanisms of which included altered carbohydrate and lipid metabolism, oxidative stress and changes in membrane electrophysiology. The present study examined to what extent these cellular perturbations involve changes in gene expression.&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Diaphragm muscle from streptozotocin-diabetic rats was analyzed with Affymetrix gene expression arrays. Diaphragm from diabetic rats had 105 genes with at least ±2-fold significantly changed expression (55 increased, 50 decreased), and these were assigned to gene ontology groups based on over-representation analysis using DAVID software. There was increased expression of genes involved in palmitoyl-CoA hydrolase activity (a component of lipid metabolism) (P = 0.037, n = 2 genes, fold change 4.2 to 27.5) and reduced expression of genes related to carbohydrate metabolism (P = 0.000061, n = 8 genes, fold change −2.0 to −8.5). Other gene ontology groups among upregulated genes were protein ubiquitination (P = 0.0053, n = 4, fold change 2.2 to 3.4), oxidoreductase activity (P = 0.024, n = 8, fold change 2.1 to 6.0), and morphogenesis (P = 0.012, n = 10, fold change 2.1 to 4.3). Other downregulated gene groups were extracellular region (including extracellular matrix and collagen) (P = 0.00032, n = 13, fold change −2.2 to −3.7) and organogenesis (P = 0.032, n = 7, fold change −2.1 to −3.7). Real-time PCR confirmed the directionality of changes in gene expression for 30 of 31 genes tested.&lt;/p&gt;

Conclusions/Significance

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;These data indicate that in diaphragm muscle type 1 diabetes increases expression of genes involved in lipid energetics, oxidative stress and protein ubiquitination, decreases expression of genes involved in carbohydrate metabolism, and has little effect on expression of ion channel genes. Reciprocal changes in expression of genes involved in carbohydrate and lipid metabolism may change the availability of energetic substrates and thereby directly modulate fatigue resistance, an important issue for a muscle like the diaphragm which needs to contract without rest for the entire lifetime of the organism.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>The Prevalence of Depression in White-European and South-Asian People with Impaired Glucose Regulation and Screen-Detected Type 2 Diabetes Mellitus</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007755" title="The Prevalence of Depression in White-European and South-Asian People with Impaired Glucose Regulation and Screen-Detected Type 2 Diabetes Mellitus" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007755&amp;representation=PDF" title="(PDF) The Prevalence of Depression in White-European and South-Asian People with Impaired Glucose Regulation and Screen-Detected Type 2 Diabetes Mellitus" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007755&amp;representation=XML" title="(XML) The Prevalence of Depression in White-European and South-Asian People with Impaired Glucose Regulation and Screen-Detected Type 2 Diabetes Mellitus" />
    <author>
      <name>Navneet Aujla et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007755</id>
    <updated>2009-11-09T08:00:00Z</updated>
    <published>2009-11-09T08:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;There is a clear relationship between depression and diabetes. However, the directionality of the relationship remains unclear and very little research has considered a multi-ethnic population. The aim of this study was to determine the prevalence of depression in a White-European (WE) and South-Asian (SA) population attending a community diabetes screening programme, and to explore the association of depression with screen-detected Type 2 diabetes mellitus (T2DM) and impaired glucose regulation (IGR).&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Participants were recruited from general practices in Leicestershire (United Kingdom) between August 2004 and December 2007. 4682 WE (40–75 years) and 1327 SA participants (25–75 years) underwent an Oral Glucose Tolerance Test, detailed history, anthropometric measurements and completed the World Health Organisation-Five (WHO-5) Wellbeing Index. Depression was defined by a WHO-5 wellbeing score ≤13. Unadjusted prevalence of depression for people in the total sample with T2DM and IGR was 21.3% (21.6% in WE, 20.6% in SA, p = 0.75) and 26.0% (25.3% in WE, 28.9% in SA, p = 0.65) respectively. For people with normal glucose tolerance, the prevalence was 25.1% (24.9% in WE, 26.4% in SA, p = 0.86). Age-adjusted prevalences were higher for females than males. Odds ratios adjusted for age, gender, and ethnicity, showed no significant increase in prevalent depression for people with T2DM (OR = 0.95, 95%CI 0.62 to 1.45) or IGR (OR = 1.17, 95%CI 0.96 to1.42).&lt;/p&gt;

Conclusions

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Prior to the knowledge of diagnosis, depression was not significantly more prevalent in people with screen detected T2DM or IGR. Differences in prevalent depression between WE and SA people were also not identified. In this multi-ethnic population, female gender was significantly associated with depression.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Islet Formation during the Neonatal Development in Mice</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007739" title="Islet Formation during the Neonatal Development in Mice" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007739&amp;representation=XML" title="(XML) Islet Formation during the Neonatal Development in Mice" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007739&amp;representation=PDF" title="(PDF) Islet Formation during the Neonatal Development in Mice" />
    <author>
      <name>Kevin Miller et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007739</id>
    <updated>2009-11-06T08:00:00Z</updated>
    <published>2009-11-06T08:00:00Z</published>
    <content type="html">&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;The islet of Langerhans is a unique micro-organ within the exocrine pancreas, which is composed of insulin-secreting beta-cells, glucagon-secreting alpha-cells, somatostatin-secreting delta-cells, pancreatic polypeptide-secreting PP cells and ghrelin-secreting epsilon-cells. Islets also contain non-endocrine cell types such as endothelial cells. However, the mechanism(s) of islet formation is poorly understood due to technical difficulties in capturing this dynamic event &lt;i&gt;in situ&lt;/i&gt;. We have developed a method to monitor beta-cell proliferation and islet formation in the intact pancreas using transgenic mice in which the beta-cells are specifically tagged with a fluorescent protein. Endocrine cells proliferate contiguously, forming branched cord-like structures in both embryos and neonates. Our study has revealed long stretches of interconnected islets located along large blood vessels in the neonatal pancreas. Alpha-cells span the elongated islet-like structures, which we hypothesize represent sites of fission and facilitate the eventual formation of discrete islets. We propose that islet formation occurs by a process of fission following contiguous endocrine cell proliferation, rather than by local aggregation or fusion of isolated beta-cells and islets. Mathematical modeling of the fission process in the neonatal islet formation is also presented.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>The GTPase RalA Regulates Different Steps of the Secretory Process in Pancreatic β-Cells</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007770" title="The GTPase RalA Regulates Different Steps of the Secretory Process in Pancreatic β-Cells" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007770&amp;representation=XML" title="(XML) The GTPase RalA Regulates Different Steps of the Secretory Process in Pancreatic β-Cells" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007770&amp;representation=PDF" title="(PDF) The GTPase RalA Regulates Different Steps of the Secretory Process in Pancreatic β-Cells" />
    <author>
      <name>Sanda Ljubicic et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007770</id>
    <updated>2009-11-05T08:00:00Z</updated>
    <published>2009-11-05T08:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;RalA and RalB are multifuntional GTPases involved in a variety of cellular processes including proliferation, oncogenic transformation and membrane trafficking. Here we investigated the mechanisms leading to activation of Ral proteins in pancreatic β-cells and analyzed the impact on different steps of the insulin-secretory process.&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;We found that RalA is the predominant isoform expressed in pancreatic islets and insulin-secreting cell lines. Silencing of this GTPase in INS-1E cells by RNA interference led to a decrease in secretagogue-induced insulin release. Real-time measurements by fluorescence resonance energy transfer revealed that RalA activation in response to secretagogues occurs within 3–5 min and reaches a plateau after 10–15 min. The activation of the GTPase is triggered by increases in intracellular Ca&lt;sup&gt;2+&lt;/sup&gt; and cAMP and is prevented by the L-type voltage-gated Ca&lt;sup&gt;2+&lt;/sup&gt; channel blocker Nifedipine and by the protein kinase A inhibitor H89. Defective insulin release in cells lacking RalA is associated with a decrease in the secretory granules docked at the plasma membrane detected by Total Internal Reflection Fluorescence microscopy and with a strong impairment in Phospholipase D1 activation in response to secretagogues. RalA was found to be activated by RalGDS and to be severely hampered upon silencing of this GDP/GTP exchange factor. Accordingly, INS-1E cells lacking RalGDS displayed a reduction in hormone secretion induced by secretagogues and in the number of insulin-containing granules docked at the plasma membrane.&lt;/p&gt;

Conclusions/Significance

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Taken together, our data indicate that RalA activation elicited by the exchange factor RalGDS in response to a rise in intracellular Ca&lt;sup&gt;2+&lt;/sup&gt; and cAMP controls hormone release from pancreatic β-cell by coordinating the execution of different events in the secretory pathway.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Fyn Mediates Leptin Actions in the Thymus of Rodents</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007707" title="Fyn Mediates Leptin Actions in the Thymus of Rodents" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007707&amp;representation=PDF" title="(PDF) Fyn Mediates Leptin Actions in the Thymus of Rodents" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007707&amp;representation=XML" title="(XML) Fyn Mediates Leptin Actions in the Thymus of Rodents" />
    <author>
      <name>Alessandra Girasol et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007707</id>
    <updated>2009-11-03T08:00:00Z</updated>
    <published>2009-11-03T08:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Several effects of leptin in the immune system rely on its capacity to modulate cytokine expression and apoptosis in the thymus. Surprisingly, some of these effects are dependent on signal transduction through the IRS1/PI3-kinase, but not on the activation of JAK2. Since all the well known effects of leptin in different cell types and tissues seem to be dependent on JAK2 activation, we hypothesized that, at least for the control of thymic function, another, unknown kinase could mediate the transduction of the leptin signal from the ObR towards the IRS1/PI3-kinase signaling cascade.&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Here, by employing immunoblot, real-time PCR and flow citometry we show that the tyrosine kinase, Fyn, is constitutively associated with the ObR in thymic cells. Following a leptin stimulus, Fyn undergoes an activating tyrosine phosphorylation and a transient association with IRS1. All these effects are independent of JAK2 activation and, upon Fyn inhibition, the signal transduction towards IRS1/PI3-kinase is abolished. In addition, the inhibition of Fyn significantly modifies the effects of leptin on thymic cytokine expression.&lt;/p&gt;

Conclusion/Significance

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Therefore, in the thymus, Fyn acts as a tyrosine kinase that transduces the leptin signal independently of JAK2 activation, and mediates some of the immunomodulatory effects of leptin in this tissue.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Increasing the Number of Thyroid Lesions Classes in Microarray Analysis Improves the Relevance of Diagnostic Markers</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007632" title="Increasing the Number of Thyroid Lesions Classes in Microarray Analysis Improves the Relevance of Diagnostic Markers" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007632&amp;representation=XML" title="(XML) Increasing the Number of Thyroid Lesions Classes in Microarray Analysis Improves the Relevance of Diagnostic Markers" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007632&amp;representation=PDF" title="(PDF) Increasing the Number of Thyroid Lesions Classes in Microarray Analysis Improves the Relevance of Diagnostic Markers" />
    <author>
      <name>Jean-Fred Fontaine et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007632</id>
    <updated>2009-10-29T07:00:00Z</updated>
    <published>2009-10-29T07:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Genetic markers for thyroid cancers identified by microarray analysis have offered limited predictive accuracy so far because of the few classes of thyroid lesions usually taken into account. To improve diagnostic relevance, we have simultaneously analyzed microarray data from six public datasets covering a total of 347 thyroid tissue samples representing 12 histological classes of follicular lesions and normal thyroid tissue. Our own dataset, containing about half the thyroid tissue samples, included all categories of thyroid lesions.&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Classifier predictions were strongly affected by similarities between classes and by the number of classes in the training sets. In each dataset, sample prediction was improved by separating the samples into three groups according to class similarities. The cross-validation of differential genes revealed four clusters with functional enrichments. The analysis of six of these genes (APOD, APOE, CLGN, CRABP1, SDHA and TIMP1) in 49 new samples showed consistent gene and protein profiles with the class similarities observed. Focusing on four subclasses of follicular tumor, we explored the diagnostic potential of 12 selected markers (CASP10, CDH16, CLGN, CRABP1, HMGB2, ALPL2, ADAMTS2, CABIN1, ALDH1A3, USP13, NR2F2, KRTHB5) by real-time quantitative RT-PCR on 32 other new samples. The gene expression profiles of follicular tumors were examined with reference to the mutational status of the Pax8-PPARγ, TSHR, GNAS and NRAS genes.&lt;/p&gt;

Conclusion/Significance

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;We show that diagnostic tools defined on the basis of microarray data are more relevant when a large number of samples and tissue classes are used. Taking into account the relationships between the thyroid tumor pathologies, together with the main biological functions and pathways involved, improved the diagnostic accuracy of the samples. Our approach was particularly relevant for the classification of microfollicular adenomas.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>Mice Chronically Fed High-Fat Diet Have Increased Mortality and Disturbed Immune Response in Sepsis</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007605" title="Mice Chronically Fed High-Fat Diet Have Increased Mortality and Disturbed Immune Response in Sepsis" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007605&amp;representation=XML" title="(XML) Mice Chronically Fed High-Fat Diet Have Increased Mortality and Disturbed Immune Response in Sepsis" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007605&amp;representation=PDF" title="(PDF) Mice Chronically Fed High-Fat Diet Have Increased Mortality and Disturbed Immune Response in Sepsis" />
    <author>
      <name>Louise Strandberg et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007605</id>
    <updated>2009-10-28T07:00:00Z</updated>
    <published>2009-10-28T07:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Sepsis is a potentially deadly disease that often is caused by gram-positive bacteria, in particular &lt;i&gt;Staphylococcus aureus&lt;/i&gt; (&lt;i&gt;S. aureus&lt;/i&gt;). As there are few effective therapies for sepsis, increased basic knowledge about factors predisposing is needed.&lt;/p&gt;

Methodology/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;The purpose of this study was to study the effect of Western diet on mortality induced by intravenous &lt;i&gt;S. aureus&lt;/i&gt; inoculation and the immune functions before and after bacterial inoculation. Here we show that C57Bl/6 mice on high-fat diet (HFD) for 8 weeks, like genetically obese Ob/Ob mice on low-fat diet (LFD), have increased mortality during &lt;i&gt;S. aureus-&lt;/i&gt;induced sepsis compared with LFD-fed C57Bl/6 controls. Bacterial load in the kidneys 5–7 days after inoculation was increased 10-fold in HFD-fed compared with LFD-fed mice. At that time, HFD-fed mice had increased serum levels and fat mRNA expression of the immune suppressing cytokines interleukin-1 receptor antagonist (IL-1Ra) and IL-10 compared with LFD-fed mice. In addition, HFD-fed mice had increased serum levels of the pro-inflammatory IL-1β. Also, HFD-fed mice with and without infection had increased levels of macrophages in fat. The proportion and function of phagocytosing granulocytes, and the production of reactive oxygen species (ROS) by peritoneal lavage cells were decreased in HFD-fed compared with LFD-fed mice.&lt;/p&gt;

Conclusions

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Our findings imply that chronic HFD disturb several innate immune functions in mice, and impairs the ability to clear &lt;i&gt;S. aureus&lt;/i&gt; and survive sepsis.&lt;/p&gt;</content>
  </entry>
  <entry>
    <title>&lt;italic&gt;PPARG&lt;/italic&gt;, &lt;italic&gt;KCNJ11&lt;/italic&gt;, &lt;italic&gt;CDKAL1&lt;/italic&gt;, &lt;italic&gt;CDKN2A-CDKN2B&lt;/italic&gt;, &lt;italic&gt;IDE-KIF11-HHEX&lt;/italic&gt;, &lt;italic&gt;IGF2BP2&lt;/italic&gt; and &lt;italic&gt;SLC30A8&lt;/italic&gt; Are Associated with Type 2 Diabetes in a Chinese Population</title>
    <link rel="alternate" href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0007643" title="&lt;italic&gt;PPARG&lt;/italic&gt;, &lt;italic&gt;KCNJ11&lt;/italic&gt;, &lt;italic&gt;CDKAL1&lt;/italic&gt;, &lt;italic&gt;CDKN2A-CDKN2B&lt;/italic&gt;, &lt;italic&gt;IDE-KIF11-HHEX&lt;/italic&gt;, &lt;italic&gt;IGF2BP2&lt;/italic&gt; and &lt;italic&gt;SLC30A8&lt;/italic&gt; Are Associated with Type 2 Diabetes in a Chinese Population" />
    <link rel="related" type="text/xml" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007643&amp;representation=XML" title="(XML) &lt;italic&gt;PPARG&lt;/italic&gt;, &lt;italic&gt;KCNJ11&lt;/italic&gt;, &lt;italic&gt;CDKAL1&lt;/italic&gt;, &lt;italic&gt;CDKN2A-CDKN2B&lt;/italic&gt;, &lt;italic&gt;IDE-KIF11-HHEX&lt;/italic&gt;, &lt;italic&gt;IGF2BP2&lt;/italic&gt; and &lt;italic&gt;SLC30A8&lt;/italic&gt; Are Associated with Type 2 Diabetes in a Chinese Population" />
    <link rel="related" type="application/pdf" href="http://www.plosone.org/article/fetchObjectAttachment.action?uri=info:doi/10.1371/journal.pone.0007643&amp;representation=PDF" title="(PDF) &lt;italic&gt;PPARG&lt;/italic&gt;, &lt;italic&gt;KCNJ11&lt;/italic&gt;, &lt;italic&gt;CDKAL1&lt;/italic&gt;, &lt;italic&gt;CDKN2A-CDKN2B&lt;/italic&gt;, &lt;italic&gt;IDE-KIF11-HHEX&lt;/italic&gt;, &lt;italic&gt;IGF2BP2&lt;/italic&gt; and &lt;italic&gt;SLC30A8&lt;/italic&gt; Are Associated with Type 2 Diabetes in a Chinese Population" />
    <author>
      <name>Cheng Hu et al.</name>
    </author>
    <id>info:doi/10.1371/journal.pone.0007643</id>
    <updated>2009-10-28T07:00:00Z</updated>
    <published>2009-10-28T07:00:00Z</published>
    <content type="html">Background

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Recent advance in genetic studies added the confirmed susceptible loci for type 2 diabetes to eighteen. In this study, we attempt to analyze the independent and joint effect of variants from these loci on type 2 diabetes and clinical phenotypes related to glucose metabolism.&lt;/p&gt;

Methods/Principal Findings

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;Twenty-one single nucleotide polymorphisms (SNPs) from fourteen loci were successfully genotyped in 1,849 subjects with type 2 diabetes and 1,785 subjects with normal glucose regulation. We analyzed the allele and genotype distribution between the cases and controls of these SNPs as well as the joint effects of the susceptible loci on type 2 diabetes risk. The associations between SNPs and type 2 diabetes were examined by logistic regression. The associations between SNPs and quantitative traits were examined by linear regression. The discriminative accuracy of the prediction models was assessed by area under the receiver operating characteristic curves. We confirmed the effects of SNPs from &lt;i&gt;PPARG&lt;/i&gt;, &lt;i&gt;KCNJ11&lt;/i&gt;, &lt;i&gt;CDKAL1&lt;/i&gt;, &lt;i&gt;CDKN2A-CDKN2B&lt;/i&gt;, &lt;i&gt;IDE-KIF11-HHEX&lt;/i&gt;, &lt;i&gt;IGF2BP2&lt;/i&gt; and &lt;i&gt;SLC30A8&lt;/i&gt; on risk for type 2 diabetes, with odds ratios ranging from 1.114 to 1.406 (&lt;i&gt;P&lt;/i&gt; value range from 0.0335 to 1.37E-12). But no significant association was detected between SNPs from &lt;i&gt;WFS1, FTO, JAZF1&lt;/i&gt;, &lt;i&gt;TSPAN8-LGR5&lt;/i&gt;, &lt;i&gt;THADA&lt;/i&gt;, &lt;i&gt;ADAMTS9&lt;/i&gt;, &lt;i&gt;NOTCH2-ADAM30&lt;/i&gt; and type 2 diabetes. Analyses on the quantitative traits in the control subjects showed that &lt;i&gt;THADA&lt;/i&gt; SNP rs7578597 was association with 2-h insulin during oral glucose tolerance tests (&lt;i&gt;P&lt;/i&gt; = 0.0005, empirical &lt;i&gt;P&lt;/i&gt; = 0.0090). The joint effect analysis of SNPs from eleven loci showed the individual carrying more risk alleles had a significantly higher risk for type 2 diabetes. And the type 2 diabetes patients with more risk allele tended to have earlier diagnostic ages (&lt;i&gt;P&lt;/i&gt; = 0.0006).&lt;/p&gt;

Conclusions/Significance

&lt;p xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:fn="http://www.w3.org/2005/xpath-functions" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:util="http://dtd.nlm.nih.gov/xsl/util" xmlns:fo="http://www.w3.org/1999/XSL/Format" xmlns:mml="http://www.w3.org/1998/Math/MathML"&gt;The current study confirmed the association between &lt;i&gt;PPARG&lt;/i&gt;, &lt;i&gt;KCNJ11&lt;/i&gt;, &lt;i&gt;CDKAL1&lt;/i&gt;, &lt;i&gt;CDKN2A-CDKN2B&lt;/i&gt;, &lt;i&gt;IDE-KIF11-HHEX&lt;/i&gt;, &lt;i&gt;IGF2BP2&lt;/i&gt; and &lt;i&gt;SLC30A8&lt;/i&gt; and type 2 diabetes. These type 2 diabetes risk loci contributed to the disease additively.&lt;/p&gt;</content>
  </entry>
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